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  5. Ceric.05G016700.1

Ceric.05G016700.1 (PARLL1, NUC-L2,...)


Aliases : PARLL1, NUC-L2, ATNUC-L2, Ceric.05G016700

Description : regulatory protein *(NCL) of rRNA transcription & original description: pacid=50578621 polypeptide=Ceric.05G016700.1.p locus=Ceric.05G016700 ID=Ceric.05G016700.1.v2.1 annot-version=v2.1


Gene families : OG0001950 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G016700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00090110 PARL1, ATNUC-L1,... RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.06 OrthoFinder output from all 47 species
AT1G48920 PARL1, ATNUC-L1, NUC-L1 nucleolin like 1 0.05 OrthoFinder output from all 47 species
Adi_g018516 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Aev_g13012 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Aev_g38951 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
Ala_g39371 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Aop_g12627 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.06 OrthoFinder output from all 47 species
Aop_g39120 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Cba_g09213 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.06 OrthoFinder output from all 47 species
Cba_g15225 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
Dac_g08175 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Dac_g45859 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Dcu_g32133 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Dde_g18065 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Ehy_g13607 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
GSVIVT01012042001 PARLL1, NUC-L2, ATNUC-L2 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.07 OrthoFinder output from all 47 species
Gb_32672 PARL1, ATNUC-L1, NUC-L1 rDNA chromatin transcription factor (NCL) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52960.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.05 OrthoFinder output from all 47 species
LOC_Os08g09350.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.04 OrthoFinder output from all 47 species
Len_g19210 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Lfl_g36622 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
MA_10433238g0010 PARL1, ATNUC-L1, NUC-L1 rDNA chromatin transcription factor (NCL) 0.05 OrthoFinder output from all 47 species
MA_11380g0030 PARLL1, NUC-L2, ATNUC-L2 rDNA chromatin transcription factor (NCL) 0.07 OrthoFinder output from all 47 species
Mp1g21390.1 PARL1, ATNUC-L1, NUC-L1 rDNA chromatin transcription factor (NCL) 0.03 OrthoFinder output from all 47 species
Msp_g21181 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.05 OrthoFinder output from all 47 species
Nbi_g06940 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Nbi_g25668 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Ore_g15393 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Pir_g05582 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Ppi_g42600 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008790 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Sam_g15345 No alias regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Sam_g19989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo234317 PARL1, ATNUC-L1, NUC-L1 RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.05 OrthoFinder output from all 47 species
Solyc02g014310.4.1 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.07 OrthoFinder output from all 47 species
Spa_g26094 PARLL1, NUC-L2, ATNUC-L2 regulatory protein *(NCL) of rRNA transcription &... 0.04 OrthoFinder output from all 47 species
Spa_g57117 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species
Tin_g09738 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.07 OrthoFinder output from all 47 species
Zm00001e004617_P003 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.03 OrthoFinder output from all 47 species
Zm00001e021609_P004 PARL1, ATNUC-L1,... rDNA chromatin transcription factor (NCL) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 464 531
IPR000504 RRM_dom 588 642
No external refs found!