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  5. Ceric.04G110000.1

Ceric.04G110000.1 (AFH14, Ceric.04G110000)


Aliases : AFH14, Ceric.04G110000

Description : group-II formin actin filament elongation factor & original description: pacid=50632184 polypeptide=Ceric.04G110000.1.p locus=Ceric.04G110000 ID=Ceric.04G110000.1.v2.1 annot-version=v2.1


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.04G110000.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Ala_g26800 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g31997 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01022808001 AFH14 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
LOC_Os07g40520.1 LOC_Os07g40520 Formin-like protein 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_637703g0010 AFH14 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g18629 No alias group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Zm00001e010693_P001 Zm00001e010693 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR014020 Tensin_C2-dom 200 337
IPR015425 FH2_Formin 823 1207
No external refs found!