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Aliases : PRP39, Ceric.04G096600
Description : pre-mRNA-processing protein *(PRP39) & original description: pacid=50632476 polypeptide=Ceric.04G096600.1.p locus=Ceric.04G096600 ID=Ceric.04G096600.1.v2.1 annot-version=v2.1
Gene families : OG0002297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00226980 | PRP39,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00179p00033790 | AT PRP39-2,... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT5G46400 | AT PRP39-2, PRP39-2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g018948 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g087387 | AT PRP39-2, PRP39-2 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g21759 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g12647 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g16599 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g37742 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009619 | PRP39 | pre-mRNA-processing protein *(PRP39) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g25483 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020911.47 | PRP39 | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g40489 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15145 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g11777 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g09806 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g11200.1 | PRP39, LOC_Os03g11200 | pre-mRNA-processing protein (PRP39) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g23571 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g19659 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_6626g0010 | PRP39 | pre-mRNA-processing protein (PRP39) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10295 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42142 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g60863 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g21848 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29159 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005318 | PRP39 | pre-mRNA-processing protein *(PRP39) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18657 | No alias | pre-mRNA-processing protein *(PRP39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo109541 | PRP39 | Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g03914 | AT PRP39-2, PRP39-2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g38613 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g56288 | PRP39 | pre-mRNA-processing protein *(PRP39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000702_P004 | PRP39, Zm00001e000702 | pre-mRNA-processing protein (PRP39) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e004246_P001 | AT PRP39-2,... | pre-mRNA-processing protein (PRP39) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| BP | GO:0032392 | DNA geometric change | IEP | HCCA |
| BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |