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  5. Ceric.04G058900.1

Ceric.04G058900.1 (Ceric.04G058900)


Aliases : Ceric.04G058900

Description : E3 ubiquitin ligase *(PIR) & original description: pacid=50631323 polypeptide=Ceric.04G058900.1.p locus=Ceric.04G058900 ID=Ceric.04G058900.1.v2.1 annot-version=v2.1


Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.04G058900.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Adi_g002649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105268 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31537.t1 Aspi01Gene31537 E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44095 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22013 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17238 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26673 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20727 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001865 No alias E3 ubiquitin ligase *(PIR) & original description: CDS=1-2784 0.03 OrthoFinder output from all 47 species
Solyc01g080430.4.1 Solyc01g080430 Putative E3 ubiquitin-protein ligase RF298... 0.03 OrthoFinder output from all 47 species
Zm00001e034899_P001 Zm00001e034899 Putative E3 ubiquitin-protein ligase RF298... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR046527 PIR2-like_helical 165 276
No external refs found!