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  5. Ceric.04G022900.1

Ceric.04G022900.1 (VPS4, SKD1, ATSKD1,...)


Aliases : VPS4, SKD1, ATSKD1, Ceric.04G022900

Description : EC_3.6 hydrolase acting on acid anhydride & original description: pacid=50631828 polypeptide=Ceric.04G022900.1.p locus=Ceric.04G022900 ID=Ceric.04G022900.1.v2.1 annot-version=v2.1


Gene families : OG0002846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.04G022900.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Aev_g03883 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
Aev_g44141 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Ala_g09447 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Cre02.g079300 VPS4, SKD1, ATSKD1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Dac_g03336 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14391 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01036166001 VPS4, SKD1, ATSKD1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder output from all 47 species
Gb_14760 VPS4, SKD1, ATSKD1 ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.05 OrthoFinder output from all 47 species
LOC_Os01g04814.1 VPS4, SKD1,... ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.04 OrthoFinder output from all 47 species
Len_g23204 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Lfl_g27517 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
MA_34399g0010 VPS4, SKD1, ATSKD1 ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 OrthoFinder output from all 47 species
MA_67052g0010 VPS4, SKD1, ATSKD1 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1... 0.03 OrthoFinder output from all 47 species
Mp8g01610.1 VPS4, SKD1, ATSKD1 ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 OrthoFinder output from all 47 species
Msp_g05076 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Msp_g11706 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Pir_g01300 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Pnu_g06021 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026926 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
Sam_g10321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37514 No alias EC_3.6 hydrolase acting on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
Solyc11g007170.2.1 VPS4, SKD1,... serine carboxypeptidase. ATPase component VPS4/SKD1 of... 0.03 OrthoFinder output from all 47 species
Solyc11g067240.2.1 VPS4, SKD1,... ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 OrthoFinder output from all 47 species
Tin_g04533 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acTing on acid anhydride & original... 0.05 OrthoFinder output from all 47 species
Zm00001e016954_P004 VPS4, SKD1,... ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.04 OrthoFinder output from all 47 species
Zm00001e025779_P001 VPS4, SKD1,... ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR015415 Vps4_C 373 437
IPR003959 ATPase_AAA_core 170 299
IPR041569 AAA_lid_3 324 357
IPR007330 MIT_dom 7 70
No external refs found!