Description : endomembrane trafficking ATG6-stability regulator protein *(TRAF1) & original description: none
Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g21634 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0015.g014184 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s2420.g111299 | No alias | not classified & original description: CDS=335-1012 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g21614 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.26G060700.1 | Ceric.26G060700 | endomembrane trafficking ATG6-stability regulator... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001366.11 | UBP13 | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g494000 | No alias | Vesicle trafficking.endomembrane trafficking.PI3-kinase... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g03193 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01018133001 | No alias | Vesicle trafficking.endomembrane trafficking.PI3-kinase... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g43280.1 | LOC_Os05g43280 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g40520.1 | LOC_Os12g40520 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g10345 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g10347 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
MA_10434493g0010 | No alias | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
Mp8g14880.1 | No alias | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.04 | OrthoFinder output from all 47 species | |
Ore_g36306 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g46286 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g15640 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0084.g018228 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g08395 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.07 | OrthoFinder output from all 47 species | |
Solyc03g005430.4.1 | Solyc03g005430 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g089560.4.1 | Solyc09g089560 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
Tin_g12910 | No alias | endomembrane trafficking ATG6-stability regulator... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e003140_P001 | Zm00001e003140 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e018034_P004 | Zm00001e018034 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019653_P002 | Zm00001e019653 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027387_P004 | Zm00001e027387 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e032087_P004 | Zm00001e032087 | TRAF1 endomembrane trafficking ATG6-stability regulator protein | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |