Aev_g48943


Description : endomembrane trafficking ATG6-stability regulator protein *(TRAF1) & original description: none


Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g48943

Target Alias Description ECC score Gene Family Method Actions
Als_g21634 No alias endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g014184 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Azfi_s2420.g111299 No alias not classified & original description: CDS=335-1012 0.02 OrthoFinder output from all 47 species
Cba_g21614 No alias endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Ceric.26G060700.1 Ceric.26G060700 endomembrane trafficking ATG6-stability regulator... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001366.11 UBP13 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre12.g494000 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.01 OrthoFinder output from all 47 species
Dcu_g03193 No alias endomembrane trafficking ATG6-stability regulator... 0.07 OrthoFinder output from all 47 species
GSVIVT01018133001 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.05 OrthoFinder output from all 47 species
LOC_Os05g43280.1 LOC_Os05g43280 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
LOC_Os12g40520.1 LOC_Os12g40520 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Lfl_g10345 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Lfl_g10347 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
MA_10434493g0010 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 OrthoFinder output from all 47 species
Ore_g36306 No alias endomembrane trafficking ATG6-stability regulator... 0.05 OrthoFinder output from all 47 species
Pir_g46286 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Ppi_g15640 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018228 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Sam_g08395 No alias endomembrane trafficking ATG6-stability regulator... 0.07 OrthoFinder output from all 47 species
Solyc03g005430.4.1 Solyc03g005430 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 OrthoFinder output from all 47 species
Solyc09g089560.4.1 Solyc09g089560 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Tin_g12910 No alias endomembrane trafficking ATG6-stability regulator... 0.04 OrthoFinder output from all 47 species
Zm00001e003140_P001 Zm00001e003140 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 OrthoFinder output from all 47 species
Zm00001e018034_P004 Zm00001e018034 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e019653_P002 Zm00001e019653 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e027387_P004 Zm00001e027387 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 OrthoFinder output from all 47 species
Zm00001e032087_P004 Zm00001e032087 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!