1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.04G006200.1

Ceric.04G006200.1 (HUA1, Ceric.04G006200)


Aliases : HUA1, Ceric.04G006200

Description : regulatory protein of RNA homeostasis & original description: pacid=50631800 polypeptide=Ceric.04G006200.1.p locus=Ceric.04G006200 ID=Ceric.04G006200.1.v2.1 annot-version=v2.1


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.04G006200.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Ehy_g07725 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036686001 HUA1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Sam_g39859 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Spa_g31290 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Spa_g37348 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 332 356
IPR000571 Znf_CCCH 119 143
IPR000571 Znf_CCCH 376 401
IPR000571 Znf_CCCH 172 197
IPR000571 Znf_CCCH 244 268
No external refs found!