Ceric.03G037800.1 (Ceric.03G037800)


Aliases : Ceric.03G037800

Description : not classified & original description: pacid=50571745 polypeptide=Ceric.03G037800.1.p locus=Ceric.03G037800 ID=Ceric.03G037800.1.v2.1 annot-version=v2.1


Gene families : OG0002966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.03G037800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00084p00036460 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
AT5G24740 No alias Protein of unknown function (DUF1162) 0.07 OrthoFinder output from all 47 species
Adi_g011972 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g14267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05069 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g26899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.91 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.92 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.51 No alias No description available 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.50 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.153 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.86 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021440.8 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g727600 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g40218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019366001 No alias No description available 0.12 OrthoFinder output from all 47 species
GSVIVT01019369001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01019371001 No alias No description available 0.09 OrthoFinder output from all 47 species
Gb_28330 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g02350.1 LOC_Os08g02350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g02354.1 LOC_Os08g02354 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10435329g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_12699g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g13250.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g16704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023047 No alias not classified & original description: CDS=181-6594 0.04 OrthoFinder output from all 47 species
Sam_g17461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439148 No alias No description available 0.09 OrthoFinder output from all 47 species
Solyc11g045140.1.1 Solyc11g045140 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e029198_P001 Zm00001e029198 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR031642 VPS13_mid_RBG 475 723
IPR009543 VPS13_VAB 1939 2154
IPR031646 VPS13_extend_chorein 2 214
IPR031645 VPS13_DH-like 2467 2634
No external refs found!