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  5. Ceric.03G033900.1

Ceric.03G033900.1 (GIF3, Ceric.03G033900)


Aliases : GIF3, Ceric.03G033900

Description : cofactor component *(GIF) of GRF-GIF transcriptional complex & original description: pacid=50571742 polypeptide=Ceric.03G033900.1.p locus=Ceric.03G033900 ID=Ceric.03G033900.1.v2.1 annot-version=v2.1


Gene families : OG0001681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.03G033900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00157130 GIF1, GIF,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.06 OrthoFinder output from all 47 species
AMTR_s00121p00019250 GIF3,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
AT5G28640 GIF1, GIF, ATGIF1, AN3 SSXT family protein 0.08 OrthoFinder output from all 47 species
Aev_g05150 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.06 OrthoFinder output from all 47 species
Als_g08181 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35942.t1 GIF3, Aspi01Gene35942 cofactor component *(GIF) of GRF-GIF transcriptional... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008015 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.06 OrthoFinder output from all 47 species
Ceric.01G062000.1 GIF3, Ceric.01G062000 cofactor component *(GIF) of GRF-GIF transcriptional... 0.04 OrthoFinder output from all 47 species
Dcu_g03501 GIF1, GIF, ATGIF1, AN3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.1 OrthoFinder output from all 47 species
Dcu_g06154 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.04 OrthoFinder output from all 47 species
GSVIVT01036262001 GIF1, GIF, ATGIF1, AN3 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.05 OrthoFinder output from all 47 species
MA_137340g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_88944g0010 GIF3 cofactor component GIF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Msp_g02331 GIF1, GIF, ATGIF1, AN3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Msp_g43502 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.03 OrthoFinder output from all 47 species
Ore_g16182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013119 GIF3 cofactor component *(GIF) of GRF-GIF transcriptional... 0.04 OrthoFinder output from all 47 species
Solyc11g006230.3.1 GIF1, GIF,... cofactor component GIF of GRF-GIF transcriptional complex 0.01 OrthoFinder output from all 47 species
Zm00001e005583_P001 GIF1, GIF,... cofactor component GIF of GRF-GIF transcriptional complex 0.09 OrthoFinder output from all 47 species
Zm00001e021165_P001 GIF3, Zm00001e021165 cofactor component GIF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007726 SS18_N 17 73
No external refs found!