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Aliases : Ceric.02G008400
Description : component *(SF3B1) of splicing factor 3B complex & original description: pacid=50585713 polypeptide=Ceric.02G008400.1.p locus=Ceric.02G008400 ID=Ceric.02G008400.1.v2.1 annot-version=v2.1
Gene families : OG0002634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002634_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.02G008400.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00101p00094580 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02669 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g58968 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02393 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g36775 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g08997 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g25739 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000402.41 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g494100 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04130 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.1 | OrthoFinder output from all 47 species | |
| Ehy_g02942 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01025852001 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_20157 | No alias | component SF3B1 of splicing factor 3B complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g05310.4 | LOC_Os02g05310 | component SF3B1 of splicing factor 3B complex | 0.06 | OrthoFinder output from all 47 species | |
| MA_11685g0010 | No alias | component SF3B1 of splicing factor 3B complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g19650.1 | No alias | component SF3B1 of splicing factor 3B complex | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04463 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g05022 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13624 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g01401 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25156 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.08 | OrthoFinder output from all 47 species | |
| Smo97336 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30068 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02906 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025224_P001 | Zm00001e025224 | component SF3B1 of splicing factor 3B complex | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015016 | SF3b_su1 | 286 | 416 |
| No external refs found! |