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  5. Ceric.01G024500.1

Ceric.01G024500.1 (KDTA, Ceric.01G024500)


Aliases : KDTA, Ceric.01G024500

Description : 3-deoxy-D-manno-octulosonic acid (Kdo) transferase *(KdtA) & original description: pacid=50591830 polypeptide=Ceric.01G024500.1.p locus=Ceric.01G024500 ID=Ceric.01G024500.1.v2.1 annot-version=v2.1


Gene families : OG0004971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004971_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G024500.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Dac_g17564 KDTA 3-deoxy-D-manno-octulosonic acid (Kdo) transferase... 0.04 OrthoFinder output from all 47 species
Solyc10g083710.2.1 KDTA, Solyc10g083710 3-deoxy-D-manno-octulosonic acid (Kdo) transferase (KdtA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007507 Glycos_transf_N 38 215
No external refs found!