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  5. Aev_g46580

Aev_g46580


Description : protein factor (NERD) of non-canonical RdDM pathway & original description: none


Gene families : OG0001217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001217_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g46580
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Ala_g06673 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Ala_g35223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g34780.1 LOC_Os05g34780 Zinc finger CCCH domain-containing protein 44... 0.03 OrthoFinder output from all 47 species
Lfl_g35904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34438 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.04 OrthoFinder output from all 47 species
Tin_g09943 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Tin_g43997 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 985 1027
IPR003121 SWIB_MDM2_domain 394 467
IPR004343 Plus-3_dom 532 635
No external refs found!