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  5. Aev_g45669

Aev_g45669 (RPS4)


Aliases : RPS4

Description : component *(uS4c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0007327 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g45669

Target Alias Description ECC score Gene Family Method Actions
ATCG00380 RPS4 chloroplast ribosomal protein S4 0.09 OrthoFinder output from all 47 species
Aob_g03663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77949 RPS4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G013600.1 RPS4, Ceric.02G013600 component *(uS4c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Ceric.09G048000.1 RPS4, Ceric.09G048000 component *(uS4c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01021975001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Gb_06832 No alias component psRPS4 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Gb_11360 RPS4 component psRPS4 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os04g16738.1 RPS4, LOC_Os04g16738 component psRPS4 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
LOC_Os04g16764.1 RPS4, LOC_Os04g16764 component psRPS4 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
LOC_Os10g38214.1 RPS4, LOC_Os10g38214 component psRPS4 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Nbi_g01687 RPS4 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g23778 RPS4 component *(uS4c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Solyc09g015330.2.1 Solyc09g015330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g022610.1.1 RPS4, Solyc11g022610 30S ribosomal protein S4, chloroplastic OS=Solanum... 0.03 OrthoFinder output from all 47 species
Spa_g55822 RPS4 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001912 Ribosomal_S4/S9_N 3 90
IPR002942 S4_RNA-bd 91 138
No external refs found!