Solyc05g005873.1.1 (Solyc05g005873.1)


Aliases : Solyc05g005873.1

Description : 29.2.1.1.1.1.13 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S13 Ribosomal protein S13/S18 family


Gene families : OG_01_0006744 (Gene family) Phylogenetic Tree(s): OG0006744_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g005873.1.1
Cluster HCCA cluster: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AT5G14320 No alias Ribosomal protein S13/S18 family 0.15 Gene family
Cre12.g493950 No alias 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.09 Gene family
GSVIVT01008933001 No alias 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.04 Gene family
LOC_Os03g49710 Os03g0704000 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.07 Gene family
MA_10431241g0010 No alias 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.04 Gene family
Smo140847 PACid_15409809 No description available 0.02 Gene family
Zm00001d033665 GRMZM2G153476 29.2.1.1.1.1.13 protein.synthesis.ribosomal... 0.1 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005622 intracellular IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 48 152
No external refs found!