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  5. Aev_g42826

Aev_g42826 (TPR16)


Aliases : TPR16

Description : not classified & original description: none


Gene families : OG0001935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g42826

Target Alias Description ECC score Gene Family Method Actions
AT5G12430 TPR16 Heat shock protein DnaJ with tetratricopeptide repeat 0.02 OrthoFinder output from all 47 species
Pir_g40987 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026765_P001 Zm00001e026765 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031378_P001 TPR16, Zm00001e031378 TPR repeat-containing thioredoxin TTL2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 1622 1705
No external refs found!