Aev_g42473

Description : mRNA stability factor *(CRP1) & original description: none

Gene families : OG0007882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007882_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g42473

Target	Alias	Description	ECC score	Gene Family Method	Actions
Aop_g06988	No alias	mRNA stability factor *(CRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z098800.1	Ceric.1Z098800	mRNA stability factor *(CRP1) & original description:...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	566	606
IPR002885	Pentatricopeptide_repeat	456	501
IPR002885	Pentatricopeptide_repeat	386	431
IPR002885	Pentatricopeptide_repeat	631	669
IPR002885	Pentatricopeptide_repeat	144	170
IPR002885	Pentatricopeptide_repeat	180	208
IPR002885	Pentatricopeptide_repeat	529	559
IPR033443	PPR_long	215	368

External Links

No external refs found!