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  5. Aev_g41720

Aev_g41720


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000998_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g41720
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00085040 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.regulation of key... 0.02 OrthoFinder output from all 47 species
AT1G15670 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g19818 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g39150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G006400.1 Ceric.19G006400 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g04414 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01017151001 No alias Secondary metabolism.phenolics.regulation of key... 0.03 OrthoFinder output from all 47 species
GSVIVT01017545001 No alias Secondary metabolism.phenolics.regulation of key... 0.03 OrthoFinder output from all 47 species
Gb_35244 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 OrthoFinder output from all 47 species
MA_4376480g0010 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 OrthoFinder output from all 47 species
MA_4797933g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7572g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003410 No alias not classified & original description: CDS=1-1110 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013134 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e021300_P001 Zm00001e021300 proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 183 228
IPR001810 F-box_dom 38 78
No external refs found!