Solyc03g115890.3.1 (Solyc03g115890.3)


Aliases : Solyc03g115890.3

Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A15 (EXPA15)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g115890.3.1
Cluster HCCA cluster: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AT1G26770 ATEXPA10,... expansin A10 0.03 Gene family
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 Gene family
GSVIVT01028474001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01032935001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g16730 Os02g0267200 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os02g16850 Os02g0268600 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g25990 Os03g0377100 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_10299189g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_104065g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d016027 GRMZM2G088791 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d027718 GRMZM2G073373 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d035104 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 158 235
IPR009009 RlpA-like_DPBB 62 147
No external refs found!