Solyc03g112820.3.1 (Solyc03g112820.3)


Aliases : Solyc03g112820.3

Description : 29.2.2.3.1 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs


Gene families : OG_01_0006454 (Gene family) Phylogenetic Tree(s): OG0006454_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g112820.3.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT5G66540 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.19 Gene family
Cpa|evm.model.tig00020604.12 No alias 29.2.2.3.1 protein.synthesis.ribosome... 0.05 Gene family
Cre08.g370601 No alias 29.2.2.3.1 protein.synthesis.ribosome... 0.19 Gene family
GSVIVT01007723001 No alias 29.2.2.3.1 protein.synthesis.ribosome... 0.12 Gene family
LOC_Os11g04200 Os11g0137100 29.2.2.3.1 protein.synthesis.ribosome... 0.07 Gene family
LOC_Os12g04010 Os12g0133900 29.2.2.3.1 protein.synthesis.ribosome... 0.05 Gene family
MA_77639g0010 No alias 29.2.2.3.1 protein.synthesis.ribosome... 0.02 Gene family
Smo423082 PACid_15418707 No description available 0.12 Gene family
Zm00001d038777 GRMZM2G005308 29.2.2.3.1 protein.synthesis.ribosome... 0.06 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
CC GO:0005732 small nucleolar ribonucleoprotein complex IEA InterProScan
BP GO:0006364 rRNA processing IEA InterProScan
CC GO:0034457 Mpp10 complex IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012173 Mpp10 215 460
IPR012173 Mpp10 21 123
No external refs found!