Aliases : ABF2, ATAREB1, AREB1
Description : bZIP class-A transcription factor & original description: none
Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aev_g37875 | |
Cluster | HCCA: Cluster_64 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G19290 | AREB2, ABF4 | ABRE binding factor 4 | 0.03 | OrthoFinder output from all 47 species | |
AT4G34000 | DPBF5, ABF3 | abscisic acid responsive elements-binding factor 3 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g001969 | ABF1 | bZIP class-A transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g61507 | ABF2, ATAREB1, AREB1 | bZIP class-A transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0206.g057820 | No alias | not classified & original description: CDS=1-264 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g08346 | ABF1 | bZIP class-A transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g33818 | ABF1 | bZIP class-A transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01034540001 | GBF4 | RNA biosynthesis.transcriptional activation.bZIP... | 0.03 | OrthoFinder output from all 47 species | |
MA_18107g0010 | ABF2, ATAREB1, AREB1 | transcription factor (bZIP) | 0.02 | OrthoFinder output from all 47 species | |
Pir_g02561 | DPBF5, ABF3 | bZIP class-A transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g33304 | AREB2, ABF4 | bZIP class-A transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000226 | DPBF3, AREB3 | bZIP class-A transcription factor & original... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004827 | bZIP | 343 | 397 |
No external refs found! |