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  5. Solyc02g089263.1.1

Solyc02g089263.1.1 (Solyc02g089263.1)


Aliases : Solyc02g089263.1

Description : 17.2.2 hormone metabolism.auxin.signal transduction Calossin-like protein required for polar auxin transport BIG (BIG)


Gene families : OG_01_0002239 (Gene family) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g089263.1.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G02260 DOC1, ASA1,... auxin transport protein (BIG) 0.11 Gene family
Cpa|evm.model.tig00000158.23 No alias 17.2.2 hormone metabolism.auxin.signal transduction... 0.02 Gene family
GSVIVT01036538001 No alias 17.2.2 hormone metabolism.auxin.signal transduction... 0.1 Gene family
LOC_Os09g07294 Os09g0247700 17.2.2 hormone metabolism.auxin.signal transduction... 0.04 Gene family
LOC_Os09g07300 No alias 17.2.2 hormone metabolism.auxin.signal transduction... 0.06 Gene family
MA_10425891g0010 No alias 17.2.2 hormone metabolism.auxin.signal transduction... 0.05 Gene family
MA_9930317g0010 No alias 17.2.2 hormone metabolism.auxin.signal transduction... 0.08 Gene family
Smo141341 PACid_15408863 No description available 0.07 Gene family
Zm00001d019881 GRMZM2G312110,... 17.2.2 hormone metabolism.auxin.signal transduction... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025704 E3_Ub_ligase_UBR4 2779 3684
IPR000433 Znf_ZZ 1208 1240
No external refs found!