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  5. Aspi01Gene69728.t1

Aspi01Gene69728.t1 (RAP2.2, Aspi01Gene69728)


Aliases : RAP2.2, Aspi01Gene69728

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene69728.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00250320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G28360 ATERF12, ERF12 ERF domain protein 12 0.02 OrthoFinder output from all 47 species
Adi_g036158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05675.t2 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene06522.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene07060.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene07506.t1 ATERF-9, ERF9,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08042.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene11862.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.08 OrthoFinder output from all 47 species
Aspi01Gene21143.t1 ATERF4, RAP2.5,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28304.t1 Aspi01Gene28304 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28740.t1 SHN3, Aspi01Gene28740 subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34458.t1 DEAR2, Aspi01Gene34458 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene37344.t1 Aspi01Gene37344 subgroup ERF-V transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene47230.t1 TINY2, Aspi01Gene47230 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene48121.t1 Aspi01Gene48121 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene59644.t1 Rap2.6L, Aspi01Gene59644 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene61392.t1 DREB26, Aspi01Gene61392 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene62684.t2 DREB26, Aspi01Gene62684 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene72133.t1 TINY2, Aspi01Gene72133 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dde_g22670 Rap2.6L not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11677 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25467 RAP2.4 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16220 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g31608 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g01199 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g08267 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021048 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g52552 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc12g038440.1.1 HRE2, Solyc12g038440 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g06007 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 91 140
No external refs found!