Aliases : SIGB, SIG2, SIGA, SIG1, RPOD1, Aspi01Gene67355
Description : basal Sigma-type transcription factor & original description: none
Gene families : OG0000565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000565_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aspi01Gene67355.t1 | |
Cluster | HCCA: Cluster_120 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G53920 | SIGC, SIG3 | RNApolymerase sigma-subunit C | 0.02 | OrthoFinder output from all 47 species | |
Cba_g10475 | SIGB, SIG2,... | basal Sigma-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g11169 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11303 | SIGB, SIG2,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g14616 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032586_P001 | SIGC, SIG3,... | basal transcription factor (Sigma) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006352 | DNA-templated transcription initiation | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |