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  5. Aspi01Gene52326.t1

Aspi01Gene52326.t1 (AMY1, ATAMY1, Aspi01Gene52326)


Aliases : AMY1, ATAMY1, Aspi01Gene52326

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene52326.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00125590 AMY3, ATAMY3,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AT1G69830 AMY3, ATAMY3 alpha-amylase-like 3 0.02 OrthoFinder output from all 47 species
Dcu_g16674 AMY3, ATAMY3 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003998 AMY3, ATAMY3 alpha amylase & original description: CDS=136-3117 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 157 217
No external refs found!