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  5. Aspi01Gene49724.t1

Aspi01Gene49724.t1 (RAP2.2, Aspi01Gene49724)


Aliases : RAP2.2, Aspi01Gene49724

Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene49724.t1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene11848.t2 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene18664.t1 TINY2, Aspi01Gene18664 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21527.t1 WIN1, SHN1,... subgroup ERF-V transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene23203.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene48784.t1 Aspi01Gene48784 cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53867.t1 DEAR4, RAP2.10,... subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene69424.t1 Aspi01Gene69424 subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70900.t1 Aspi01Gene70900 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60740 RAP2.11 transcription factor *(ERN1) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g49762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43816 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47937 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016650 ERF38, ATERF38 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 67 116
No external refs found!