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  5. Aev_g34755

Aev_g34755


Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g34755
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT5G57180 CIA2 chloroplast import apparatus 2 0.03 OrthoFinder output from all 47 species
Adi_g009638 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17463 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62865 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g034007 No alias CMF transcription factor & original description: CDS=693-2417 0.02 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Lfl_g06124 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06152 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17180 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28029 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19039 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17788 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g15685 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005433_P002 Zm00001e005433 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Zm00001e036760_P001 Zm00001e036760 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 532 568
IPR000315 Znf_B-box 85 129
No external refs found!