Aspi01Gene49370.t1 (ATGLR3.5, GLR6,...)

Aliases : ATGLR3.5, GLR6, GLR3.5, Aspi01Gene49370

Description : ligand-gated cation channel *(GLR) & original description: none

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene49370.t1
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00181760	ATGLR2.9,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00182190	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00182440	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00182630	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00062p00056200	GLR3.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AT3G07520	GLR1.4, ATGLR1.4	glutamate receptor 1.4	0.03	OrthoFinder output from all 47 species
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.03	OrthoFinder output from all 47 species
Ala_g26986	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g38137	ATGLR3.2,...	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g11479	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g58181	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g06276	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g10462	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0038.g026158	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.04	OrthoFinder output from all 47 species
Cba_g76037	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.01G008100.1	ATGLR3.2,...	ligand-gated cation channel *(GLR) & original...	0.04	OrthoFinder output from all 47 species
Ceric.01G024600.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.03G069800.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.25G048200.1	GLR3.3,...	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Ceric.28G068100.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.04	OrthoFinder output from all 47 species
Ehy_g02879	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g26350	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01005235001	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01033150001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
GSVIVT01033163001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
LOC_Os02g54640.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os04g49570.2	GLR3.3,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Lfl_g07325	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g28830	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10426811g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_9039812g0010	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Msp_g15242	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g16200	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g15142	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g16585	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g43700	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44056	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15232	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g30122	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g57319	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g58977	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60157	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g62643	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g34592	No alias	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g077290.2.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Solyc06g063180.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Solyc07g052400.3.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Spa_g09957	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g24307	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g47108	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g09477	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g25033	GLUR3, GLR3.4, ATGLR3.4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31865	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e032648_P001	ATGLR3.5, GLR6,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019594	Glu/Gly-bd	92	136

External Links

No external refs found!

Aspi01Gene49370.t1 (ATGLR3.5, GLR6,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation