Aspi01Gene48933.t1 (RAP2.2, Aspi01Gene48933)

Aliases : RAP2.2, Aspi01Gene48933

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene48933.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00107p00095070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AMTR_s00148p00084540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT2G25820	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.02	OrthoFinder output from all 47 species
AT4G11140	CRF1	cytokinin response factor 1	0.04	OrthoFinder output from all 47 species
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT4G34410	RRTF1	redox responsive transcription factor 1	0.02	OrthoFinder output from all 47 species
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Aev_g08193	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Aop_g08977	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Aop_g09282	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aop_g26411	RAP2.1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g69933	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17042.t1	Aspi01Gene17042	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene17044.t1	Aspi01Gene17044	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene17045.t1	Aspi01Gene17045	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene21134.t1	Aspi01Gene21134	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene37118.t1	Aspi01Gene37118	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0065.g035884	No alias	subgroup ERF-V transcription factor & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0275.g061420	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Cba_g11545	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ceric.02G053400.1	ERF7, ATERF7,...	not classified & original description: pacid=50585332...	0.03	OrthoFinder output from all 47 species
Ceric.05G034500.1	DEAR2, Ceric.05G034500	not classified & original description: pacid=50578330...	0.03	OrthoFinder output from all 47 species
Ceric.23G011400.1	Ceric.23G011400	subgroup ERF-VI transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cre08.g364400	RAP2.2	No description available	0.03	OrthoFinder output from all 47 species
Dac_g11691	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g10280	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g17120	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01004798001	ERF-1, ATERF-1	No description available	0.03	OrthoFinder output from all 47 species
LOC_Os02g51670.1	RAP2.4, LOC_Os02g51670	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os03g64260.1	ERF1, ATERF1,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os04g56150.1	LOC_Os04g56150	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os06g11860.1	RAP2.4, LOC_Os06g11860	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os08g36920.1	RRTF1, LOC_Os08g36920	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g13940.2	LOC_Os09g13940	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os10g41330.1	ERF-6-6, ERF6,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Lfl_g03871	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
MA_5658g0010	ATERF12, ERF12	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_78784g0010	ATERF3, ERF3	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_84578g0010	HRE1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Msp_g03917	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g08809	CRF4	subgroup ERF-VI transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g08810	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01764	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Nbi_g12369	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g12944	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ore_g02477	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20838	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ore_g32986	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11296	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g28144	DDF1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g12997	CRF4	subgroup ERF-VI transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g17467	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g006320.1.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc06g063070.3.1	RAP2.12, Solyc06g063070	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc08g078410.2.1	Solyc08g078410	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Solyc09g089910.1.1	Solyc09g089910	transcription factor (ERF). transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Spa_g29088	Rap2.6L	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g30473	Rap2.6L	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g52658	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g00486	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Tin_g22842	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007447_P001	Zm00001e007447	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e015429_P001	Zm00001e015429	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e022016_P001	Zm00001e022016	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e023816_P001	Zm00001e023816	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e029878_P001	DREB1A, ATCBF3,...	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e035811_P001	PUCHI, Zm00001e035811	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	99	148

External Links

No external refs found!

Aspi01Gene48933.t1 (RAP2.2, Aspi01Gene48933)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation