Aspi01Gene46867.t1 (Aspi01Gene46867)

Aliases : Aspi01Gene46867

Description : EC_3.2 glycosylase & original description: none

Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene46867.t1

Target	Alias	Description	ECC score	Gene Family Method
AT1G60590	No alias	Pectin lyase-like superfamily protein	0.05	OrthoFinder output from all 47 species
AT3G26610	No alias	Pectin lyase-like superfamily protein	0.06	OrthoFinder output from all 47 species
AT3G57510	ADPG1	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G01890	No alias	Pectin lyase-like superfamily protein	0.04	OrthoFinder output from all 47 species
Ala_g28456	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g39684	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene13416.t1	Aspi01Gene13416	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0030.g024436	No alias	EC_3.2 glycosylase & original description: CDS=1-1320	0.03	OrthoFinder output from all 47 species
Ceric.20G025000.1	Ceric.20G025000	EC_3.2 glycosylase & original description:...	0.05	OrthoFinder output from all 47 species
Dcu_g43003	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g44374	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09828	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g22868	No alias	polygalacturonase *(PGX1-like) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g25659	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01032447001	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01033364001	ADPG2, PGAZAT	Cell wall.pectin.modification and...	0.03	OrthoFinder output from all 47 species
Gb_05788	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_07779	No alias	Polygalacturonase OS=Actinidia deliciosa...	0.04	OrthoFinder output from all 47 species
LOC_Os01g07790.1	QRT2, LOC_Os01g07790	Probable polygalacturonase At3g15720 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os01g19170.1	LOC_Os01g19170	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os03g11760.1	QRT2, LOC_Os03g11760	Polygalacturonase OS=Actinidia deliciosa...	0.02	OrthoFinder output from all 47 species
LOC_Os11g14400.1	LOC_Os11g14400	Polygalacturonase OS=Prunus persica...	0.03	OrthoFinder output from all 47 species
MA_13282g0010	No alias	Polygalacturonase OS=Actinidia deliciosa...	0.03	OrthoFinder output from all 47 species
MA_285723g0010	No alias	Polygalacturonase OS=Persea americana...	0.03	OrthoFinder output from all 47 species
MA_427851g0010	No alias	Polygalacturonase OS=Cryptomeria japonica...	0.02	OrthoFinder output from all 47 species
MA_63122g0010	No alias	Polygalacturonase OS=Actinidia deliciosa...	0.03	OrthoFinder output from all 47 species
Mp3g10720.1	No alias	Polygalacturonase OS=Chamaecyparis obtusa...	0.03	OrthoFinder output from all 47 species
Mp3g21140.1	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Nbi_g06863	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Smo111266	ADPG2, PGAZAT	Polygalacturonase OS=Chamaecyparis obtusa	0.05	OrthoFinder output from all 47 species
Smo78038	No alias	Cell wall.pectin.modification and...	0.04	OrthoFinder output from all 47 species
Solyc01g079130.2.1	Solyc01g079130	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc03g113230.3.1	Solyc03g113230	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc03g116580.4.1	Solyc03g116580	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc04g015530.3.1	ADPG2, PGAZAT,...	polygalacturonase (QRT2)	0.03	OrthoFinder output from all 47 species
Solyc05g005040.4.1	Solyc05g005040	polygalacturonase (PGX1)	0.03	OrthoFinder output from all 47 species
Solyc08g014560.3.1	Solyc08g014560	Polygalacturonase OS=Prunus persica...	0.03	OrthoFinder output from all 47 species
Solyc10g080210.2.1	QRT2, Solyc10g080210	polygalacturonase (QRT2)	0.02	OrthoFinder output from all 47 species
Solyc12g009420.3.1	QRT2, Solyc12g009420	Polygalacturonase QRT2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Zm00001e011814_P002	ADPG2, PGAZAT,...	Polygalacturonase OS=Actinidia deliciosa...	0.04	OrthoFinder output from all 47 species
Zm00001e013553_P001	Zm00001e013553	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Zm00001e026240_P001	Zm00001e026240	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e027720_P001	Zm00001e027720	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e032294_P001	Zm00001e032294	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e036989_P001	Zm00001e036989	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	100	424

External Links

No external refs found!

Aspi01Gene46867.t1 (Aspi01Gene46867)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation