Aev_g33943 (ATHB1, ATHB-1, HAT5,...)

Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1

Description : regulatory protein *(LMI1) of floral meristem identity control & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g33943

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00214750	HB6, ATHB6,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.02	OrthoFinder output from all 47 species
Als_g32740	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
LOC_Os02g43330.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os03g08960.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os04g45810.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Ore_g29472	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pir_g28211	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g29089	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g12909	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pnu_g26806	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Zm00001e010004_P002	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0034508	centromere complex assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	80	133
IPR003106	Leu_zip_homeo	135	169

External Links

No external refs found!