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  5. Aspi01Gene40723.t2

Aspi01Gene40723.t2 (AMY3, ATAMY3, Aspi01Gene40723)


Aliases : AMY3, ATAMY3, Aspi01Gene40723

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene40723.t2
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT1G69830 AMY3, ATAMY3 alpha-amylase-like 3 0.03 OrthoFinder output from all 47 species
Aev_g38496 AMY3, ATAMY3 alpha amylase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g56456 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 924 986
IPR006047 Glyco_hydro_13_cat_dom 621 903
No external refs found!