Aspi01Gene33912.t1 (PLT2, Aspi01Gene33912)


Aliases : PLT2, Aspi01Gene33912

Description : AP2-type transcription factor *(WRI/AIL) & original description: none


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene33912.t1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene04754.t1 Aspi01Gene04754 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene04754.t2 Aspi01Gene04754 AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene38120.t1 PLT2, Aspi01Gene38120 AP2-type transcription factor *(WRI/AIL) & original... 0.07 OrthoFinder output from all 47 species
Cre08.g385350 HRE1 No description available 0.02 OrthoFinder output from all 47 species
Ehy_g23731 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Len_g08830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20649 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.06 OrthoFinder output from all 47 species
Msp_g24368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c12_15970V3.1 Rap2.6L, Pp3c12_15970 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c12_16100V3.1 Rap2.6L, Pp3c12_16100 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 491 541
IPR001471 AP2/ERF_dom 388 447
No external refs found!