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  5. Aspi01Gene32282.t1

Aspi01Gene32282.t1 (DCL4, ATDCL4, Aspi01Gene32282)


Aliases : DCL4, ATDCL4, Aspi01Gene32282

Description : not classified & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene32282.t1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00015000 DCL1, CAF,... RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.02 OrthoFinder output from all 47 species
AT5G20320 DCL4, ATDCL4 dicer-like 4 0.03 OrthoFinder output from all 47 species
Adi_g022447 DCL1, CAF,... endoribonuclease (DCL4) of transacting siRNA pathway &... 0.03 OrthoFinder output from all 47 species
Adi_g068389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13307 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.04 OrthoFinder output from all 47 species
Aspi01Gene47448.t2 DCL1, CAF,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g01358 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.05 OrthoFinder output from all 47 species
Ceric.01G108700.1 DCL4, ATDCL4,... endoribonuclease (DCL4) of transacting siRNA pathway &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g68120.1 ATDCL3, DCL3,... endoribonuclease (DCL3) 0.03 OrthoFinder output from all 47 species
Len_g46652 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.04 OrthoFinder output from all 47 species
MA_10436812g0020 DCL4, ATDCL4 Dicer-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g15966 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g25122 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g54675 ATDCL2, DCL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo74321 DCL4, ATDCL4 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.03 OrthoFinder output from all 47 species
Spa_g28946 DCL1, CAF,... endoribonuclease *(DCL3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012493_P001 ATDCL2, DCL2,... Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e018890_P004 ATDCL3, DCL3,... endoribonuclease (DCL3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 182 251
IPR001202 WW_dom 436 461
IPR001202 WW_dom 393 420
No external refs found!