Solyc01g096320.3.1 (Solyc01g096320.3)


Aliases : Solyc01g096320.3

Description : No description available


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g096320.3.1
Cluster HCCA cluster: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.05 Gene family
AT4G40060 ATHB16, HB16, ATHB-16 homeobox protein 16 0.08 Gene family
AT5G65310 ATHB5, ATHB-5, HB5 homeobox protein 5 0.02 Gene family
GSVIVT01027407001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
LOC_Os02g43330 Os02g0649300 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os02g49700 Os02g0729700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
LOC_Os09g21180 Os09g0379600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_238039g0010 No alias No description available 0.01 Gene family
MA_3981761g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
Solyc03g082550.3.1 Solyc03g082550.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc03g113270.3.1 Solyc03g113270.3 No description available 0.02 Gene family
Solyc04g005800.3.1 Solyc04g005800.3 No description available 0.04 Gene family
Zm00001d002799 GRMZM2G351330 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d005951 GRMZM2G041127 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.08 Gene family
Zm00001d017422 GRMZM2G117164 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.05 Gene family
Zm00001d027852 GRMZM2G139963 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d033005 GRMZM2G097349 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d048312 GRMZM2G178741 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d050310 GRMZM2G122076 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 45 96
IPR003106 Leu_zip_homeo 98 138
No external refs found!