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  5. Aspi01Gene30492.t1

Aspi01Gene30492.t1 (ATGLR3.5, GLR6,...)


Aliases : ATGLR3.5, GLR6, GLR3.5, Aspi01Gene30492

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene30492.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00176450 ATGLR2.9,... Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
Ala_g04471 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21648 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31440 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01033150001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
GSVIVT01033160001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
Gb_27767 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Lfl_g15681 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10226232g0010 ATGLR3.1, GLR2,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_10428186g0010 GLR2.3, ATGLR2.3 ligand-gated cation channel (GLR) 0.06 OrthoFinder output from all 47 species
MA_10428186g0020 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.05 OrthoFinder output from all 47 species
MA_3635444g0010 GLR2.7, ATGLR2.7 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_6222576g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_7872524g0010 ATGLR3.1, GLR2,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Zm00001e023728_P001 GLR2.8,... ligand-gated cation channel (GLR) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019594 Glu/Gly-bd 42 146
No external refs found!