Aspi01Gene29034.t1 (CRF3, Aspi01Gene29034)

Aliases : CRF3, Aspi01Gene29034

Description : subgroup ERF-VI transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene29034.t1

Target	Alias	Description	ECC score	Gene Family Method
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT1G80580	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT4G17490	ERF-6-6, ERF6, ATERF6	ethylene responsive element binding factor 6	0.03	OrthoFinder output from all 47 species
AT5G47220	ERF2, ATERF2, ATERF-2	ethylene responsive element binding factor 2	0.03	OrthoFinder output from all 47 species
Adi_g082375	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g22400	TINY2	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Als_g06158	No alias	subgroup ERF-V transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g20815	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Als_g31310	Rap2.6L	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g18865	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0449.g070711	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.02G066200.1	DEAR2, Ceric.02G066200	subgroup ERF-II transcription factor *(ERF19/20) &...	0.04	OrthoFinder output from all 47 species
Ceric.15G043800.1	HRE2, Ceric.15G043800	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ceric.16G067500.1	tny, Ceric.16G067500	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g12673	No alias	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g10370.1	tny, LOC_Os01g10370	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_500288g0010	ABI4, SAN5,...	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Nbi_g16730	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g05242	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g05913	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010554	tny	not classified & original description: CDS=1-1182	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023147	No alias	not classified & original description: CDS=1-1539	0.03	OrthoFinder output from all 47 species
Sam_g06091	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g117230.1.1	Solyc03g117230	Ethylene-responsive transcription factor ERF084...	0.03	OrthoFinder output from all 47 species
Solyc12g013660.3.1	Solyc12g013660	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Tin_g01520	RAP2.4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g44754	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e015312_P001	ERF-1, ATERF-1,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e015328_P001	Zm00001e015328	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e023224_P001	Zm00001e023224	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e023816_P001	Zm00001e023816	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e036130_P001	RAP2.4, Zm00001e036130	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e037241_P001	Zm00001e037241	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	440	490

External Links

No external refs found!

Aspi01Gene29034.t1 (CRF3, Aspi01Gene29034)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation