Aspi01Gene28740.t1 (SHN3, Aspi01Gene28740)

Aliases : SHN3, Aspi01Gene28740

Description : subgroup ERF-V transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene28740.t1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g035090	HRE2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g072233	RAP2.6	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g074528	ERF-1, ATERF-1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01204	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07222	No alias	subgroup ERF-I transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g15838	tny	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene00047.t1	TINY2, Aspi01Gene00047	subgroup ERF-III transcription factor & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene01047.t1	Aspi01Gene01047	subgroup ERF-V transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene04813.t1	DEAR1, CEJ1,...	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene05675.t2	Aspi01Gene05675	subgroup ERF-III transcription factor & original...	0.11	OrthoFinder output from all 47 species
Aspi01Gene07060.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.09	OrthoFinder output from all 47 species
Aspi01Gene07506.t1	ATERF-9, ERF9,...	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene07643.t1	ORA47, Aspi01Gene07643	subgroup ERF-II transcription factor *(ERF19/20) &...	0.07	OrthoFinder output from all 47 species
Aspi01Gene08042.t1	DREB2A, DREB2,...	subgroup ERF-IV/DREB2 transcription factor & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene09666.t1	TINY2, Aspi01Gene09666	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene11862.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.11	OrthoFinder output from all 47 species
Aspi01Gene15146.t1	Aspi01Gene15146	subgroup ERF-V transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene17042.t1	Aspi01Gene17042	subgroup ERF-III transcription factor & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene17044.t1	Aspi01Gene17044	subgroup ERF-III transcription factor & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene17045.t1	Aspi01Gene17045	subgroup ERF-III transcription factor & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene21143.t1	ATERF4, RAP2.5,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene23168.t1	DREB26, Aspi01Gene23168	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene24331.t1	Aspi01Gene24331	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene24332.t1	Aspi01Gene24332	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene26705.t1	TINY2, Aspi01Gene26705	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene28304.t1	Aspi01Gene28304	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene32071.t1	Aspi01Gene32071	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene32074.t1	Aspi01Gene32074	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Aspi01Gene34458.t1	DEAR2, Aspi01Gene34458	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Aspi01Gene37344.t1	Aspi01Gene37344	subgroup ERF-V transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene47254.t1	TINY2, Aspi01Gene47254	subgroup ERF-III transcription factor & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene47265.t1	TINY2, Aspi01Gene47265	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene49723.t1	HRE2, Aspi01Gene49723	transcription factor component *(HRE/RAP2.12) of...	0.06	OrthoFinder output from all 47 species
Aspi01Gene49728.t1	HRE2, Aspi01Gene49728	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene49729.t1	HRE2, Aspi01Gene49729	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene49730.t1	HRE2, Aspi01Gene49730	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene51269.t1	TINY2, Aspi01Gene51269	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene56613.t1	Aspi01Gene56613	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene58502.t1	Aspi01Gene58502	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene59644.t1	Rap2.6L, Aspi01Gene59644	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aspi01Gene61392.t1	DREB26, Aspi01Gene61392	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene61395.t1	RAP2.9, DEAR5,...	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene62044.t1	CRF3, Aspi01Gene62044	subgroup ERF-VI transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene62684.t2	DREB26, Aspi01Gene62684	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.06	OrthoFinder output from all 47 species
Aspi01Gene65341.t1	Aspi01Gene65341	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65344.t1	Aspi01Gene65344	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene65346.t1	Aspi01Gene65346	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene65347.t1	Aspi01Gene65347	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene65348.t1	Aspi01Gene65348	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene65349.t1	Aspi01Gene65349	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene65353.t1	Aspi01Gene65353	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene68341.t1	ATERF-9, ERF9,...	subgroup ERF-VIII transcription factor & original...	0.11	OrthoFinder output from all 47 species
Aspi01Gene69728.t1	RAP2.2, Aspi01Gene69728	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Aspi01Gene72133.t1	TINY2, Aspi01Gene72133	subgroup ERF-III transcription factor & original...	0.05	OrthoFinder output from all 47 species
Cba_g15964	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.08G056100.1	Ceric.08G056100	not classified & original description: pacid=50637809...	0.03	OrthoFinder output from all 47 species
Dac_g11175	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g23065	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g25852	RAP2.1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g39447	No alias	subgroup ERF-V transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g22670	Rap2.6L	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g25360	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g30595	ATERF4, RAP2.5,...	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ehy_g28249	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01033416001	RAP2.11	External stimuli response.biotic...	0.03	OrthoFinder output from all 47 species
Len_g16168	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g34955	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g10709	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c5_11150V3.1	Pp3c5_11150	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020656	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024985	CRF3	subgroup ERF-VI transcription factor & original...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	9	58

External Links

No external refs found!

Aspi01Gene28740.t1 (SHN3, Aspi01Gene28740)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation