Aspi01Gene28731.t1 (TEM1, EDF1, Aspi01Gene28731)

Aliases : TEM1, EDF1, Aspi01Gene28731

Description : AP2-RAV-type transcription factor *(EDF) & original description: none

Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene28731.t1

Target	Alias	Description	ECC score	Gene Family Method
Als_g17658	TEM1, EDF1	AP2-RAV-type transcription factor *(EDF) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene01056.t1	EDF4, RAV1,...	AP2-RAV-type transcription factor *(EDF) & original...	0.06	OrthoFinder output from all 47 species
Ceric.16G035200.1	TEM1, EDF1,...	AP2-RAV-type transcription factor *(EDF) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01019699001	NGA1	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
GSVIVT01027463001	NGA1	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
LOC_Os01g49830.1	EDF2, AtRAV2,...	transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)	0.02	OrthoFinder output from all 47 species
LOC_Os05g47650.1	EDF2, AtRAV2,...	transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)	0.03	OrthoFinder output from all 47 species
LOC_Os06g01860.1	LOC_Os06g01860	transcription factor (RAV/NGATHA)	0.03	OrthoFinder output from all 47 species
LOC_Os08g06120.1	NGA1, LOC_Os08g06120	transcription factor (RAV/NGATHA)	0.04	OrthoFinder output from all 47 species
LOC_Os10g39190.1	NGA1, LOC_Os10g39190	transcription factor (RAV/NGATHA)	0.04	OrthoFinder output from all 47 species
LOC_Os12g06080.1	LOC_Os12g06080	transcription factor (RAV/NGATHA)	0.02	OrthoFinder output from all 47 species
MA_10436315g0020	EDF4, RAV1	transcription factor (RAV/NGATHA)	0.02	OrthoFinder output from all 47 species
MA_246350g0010	EDF4, RAV1	transcription factor (RAV/NGATHA)	0.04	OrthoFinder output from all 47 species
Solyc10g083210.2.1	Solyc10g083210	transcription factor (RAV/NGATHA)	0.03	OrthoFinder output from all 47 species
Spa_g28812	EDF2, AtRAV2,...	AP2-RAV-type transcription factor *(EDF) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e002215_P001	NGA3, Zm00001e002215	transcription factor (RAV/NGATHA)	0.01	OrthoFinder output from all 47 species
Zm00001e024165_P001	Zm00001e024165	transcription factor (RAV/NGATHA)	0.03	OrthoFinder output from all 47 species
Zm00001e041372_P001	NGA1, Zm00001e041372	transcription factor (RAV/NGATHA)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	338	429
IPR001471	AP2/ERF_dom	165	211

External Links

No external refs found!

Aspi01Gene28731.t1 (TEM1, EDF1, Aspi01Gene28731)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation