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  5. Aspi01Gene28192.t1

Aspi01Gene28192.t1 (PEPC1, ATPEPC1,...)


Aliases : PEPC1, ATPEPC1, ATPPC1, PPC1, Aspi01Gene28192

Description : not classified & original description: none


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene28192.t1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Als_g01187 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09638.t1 ATPPC3, PPC3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20593 PEPC1, ATPEPC1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre03.g171950 ATPPC4, PPC4 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.01 OrthoFinder output from all 47 species
Dac_g23356 PPC2, ATPPC2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29108 ATPPC3, PPC3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g14770.1 PPC2, ATPPC2,... PEP carboxylase 0.03 OrthoFinder output from all 47 species
MA_34134g0010 PEPC1, ATPEPC1,... Phosphoenolpyruvate carboxylase OS=Picea abies... 0.02 OrthoFinder output from all 47 species
Ore_g08406 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02364 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05923 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g007290.4.1 ATPPC3, PPC3,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
Tin_g11401 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021135 PEP_COase 48 200
No external refs found!