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  5. Aspi01Gene24353.t1

Aspi01Gene24353.t1 (SECA1, AtcpSecA,...)


Aliases : SECA1, AtcpSecA, AGY1, Aspi01Gene24353

Description : not classified & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene24353.t1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT1G21650 SECA2 Preprotein translocase SecA family protein 0.03 OrthoFinder output from all 47 species
Adi_g021940 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10215.t1 SECA1, AtcpSecA,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G067600.1 SECA1, AtcpSecA,... component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Dde_g11939 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
GSVIVT01028249001 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.03 OrthoFinder output from all 47 species
Lfl_g02357 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Nbi_g12724 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Nbi_g30518 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ppi_g14444 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ppi_g53734 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Spa_g17299 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Tin_g12949 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011130 SecA_preprotein_X-link_dom 323 416
IPR011115 SecA_DEAD 108 322
No external refs found!