Aspi01Gene23222.t2 (Aspi01Gene23222)

Aliases : Aspi01Gene23222

Description : EC_3.2 glycosylase & original description: none

Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene23222.t2

Target	Alias	Description	ECC score	Gene Family Method
AT3G06770	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Ceric.37G027600.1	Ceric.37G027600	not classified & original description: pacid=50616932...	0.02	OrthoFinder output from all 47 species
Ehy_g07611	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Mp7g13870.1	No alias	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species
Nbi_g04774	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g15019	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g49091	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g10358	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g31037	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc05g049980.3.1	Solyc05g049980	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species
Solyc06g060170.3.1	Solyc06g060170	Probable polygalacturonase OS=Vitis vinifera...	0.02	OrthoFinder output from all 47 species
Spa_g26618	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e034257_P001	Zm00001e034257	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	157	437

External Links

No external refs found!