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  5. Aspi01Gene23218.t1

Aspi01Gene23218.t1 (Aspi01Gene23218)


Aliases : Aspi01Gene23218

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene23218.t1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT3G16850 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g06573 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g01611 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g07611 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019405001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
LOC_Os09g26800.1 LOC_Os09g26800 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os11g43750.1 LOC_Os11g43750 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_11025g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
MA_88519g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Nbi_g04774 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43812 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09993 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007744 No alias EC_3.2 glycosylase & original description: CDS=819-1838 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0800.g027729 No alias EC_3.2 glycosylase & original description: CDS=1-1569 0.02 OrthoFinder output from all 47 species
Sam_g49018 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g117750.3.1 Solyc03g117750 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc05g049980.3.1 Solyc05g049980 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc07g042160.3.1 Solyc07g042160 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
Solyc09g075460.3.1 Solyc09g075460 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Spa_g14594 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029809_P002 Zm00001e029809 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e034257_P001 Zm00001e034257 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 157 437
No external refs found!