1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene21443.t1

Aspi01Gene21443.t1 (XTR3, XTH25, Aspi01Gene21443)


Aliases : XTR3, XTH25, Aspi01Gene21443

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene21443.t1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00242980 XTR6, XTH23,... Enzyme classification.EC_2 transferases.EC_2.4... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00243070 MERI5B, XTH24,... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00243410 XTR6, XTH23,... Enzyme classification.EC_2 transferases.EC_2.4... 0.01 OrthoFinder output from all 47 species
AT4G25820 XTH14, ATXTH14, XTR9 xyloglucan endotransglucosylase/hydrolase 14 0.03 OrthoFinder output from all 47 species
AT5G57530 AtXTH12, XTH12 xyloglucan endotransglucosylase/hydrolase 12 0.03 OrthoFinder output from all 47 species
AT5G65730 XTH6 xyloglucan endotransglucosylase/hydrolase 6 0.02 OrthoFinder output from all 47 species
Ehy_g04416 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_144503g0010 XTH9 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
MA_14679g0010 XTH16 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
Mp2g21490.1 XTH7 Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
Mp4g10000.1 XTH5, EXGT-A4 Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
Ore_g10029 XTH8 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17617 AtXTH12, XTH12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012055 XTH16 EC_2.4 glycosyltransferase & original description: CDS=448-1341 0.04 OrthoFinder output from all 47 species
Solyc07g006860.3.1 TCH4, XTH22,... Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
CC GO:0005618 cell wall IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
BP GO:0006073 cellular glucan metabolic process IEA Interproscan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA Interproscan
CC GO:0048046 apoplast IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000757 GH16 169 346
IPR010713 XET_C 387 415
No external refs found!