Aliases : SOC1, AGL20, ATSOC1, Aspi01Gene19451
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G22540 | SVP, AGL22 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G02310 | AGL4, SEP2 | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G37940 | AGL21 | AGAMOUS-like 21 | 0.03 | OrthoFinder output from all 47 species | |
AT5G15800 | AGL2, SEP1 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G60910 | AGL8, FUL | AGAMOUS-like 8 | 0.04 | OrthoFinder output from all 47 species | |
Als_g11193 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g51470 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g61790 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g40548 | AGL13 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g04967 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g16031 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g47174 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.12G051800.1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g10603 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dde_g50123 | AGL3, SEP4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g21427 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009171001 | SVP, AGL22 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009393001 | AGL104 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01010521001 | AGL9, SEP3 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01018446001 | AGL42 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01038474001 | AGL16 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g45770.1 | AGL6, LOC_Os02g45770 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g54170.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Len_g17248 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g52703 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g08300 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g33207 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10289256g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
MA_19296g0010 | AGL9, SEP3 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_6279308g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
MA_75656g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_9544285g0010 | AGL42 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g39561 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g18297 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g28516 | AGL66 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g42768 | AGL8, FUL | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g19814 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g21068 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g26233 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g04968 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g13078 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g33044 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g40642 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002217 | AGL15 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0006.g003069 | No alias | not classified & original description: CDS=1-255 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g06486 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g15354 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g26111 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26914 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo437868 | AGL29 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g080785.1.1 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g092950.3.1 | SOC1, AGL20,... | MADS-box protein SOC1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g089210.4.1 | AGL7, AP1, Solyc02g089210 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g091550.2.1 | AGL21, Solyc02g091550 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g012020.4.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g080030.2.1 | AGL18, Solyc10g080030 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22852 | AGL65 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g20318 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g28519 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015728_P001 | AGL16, Zm00001e015728 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |