Aspi01Gene17817.t1 (AGL6, Aspi01Gene17817)


Aliases : AGL6, Aspi01Gene17817

Description : not classified & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene17817.t1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.04 OrthoFinder output from all 47 species
Aev_g20345 AGL7, AP1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33320 AGL14 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36405 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38673 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17774.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene17819.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011788 XAL1, AGL12 MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g38860 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18862 ANR1, AGL44 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012110001 AGL32, TT16, ABS RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01025945001 STK, AGL11 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01026207001 AGL32, TT16, ABS RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01035477001 AGL30 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
Len_g38722 AGL1, SHP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32782 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_175522g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_19007g0020 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_6544g0010 STK, AGL11 Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.03 OrthoFinder output from all 47 species
Pp3c16_19170V3.1 AGL61, DIA, Pp3c16_19170 AGAMOUS-like 61 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004031 AGL29 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc03g019710.3.1 SHP2, AGL5,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Solyc03g114840.3.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e015728_P001 AGL16, Zm00001e015728 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 2 75
No external refs found!