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  5. Aev_g30703

Aev_g30703


Description : component *(RBM26) of PAXT nucleoplasmic activation complex & original description: none


Gene families : OG0001970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g30703

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00062910 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 27 OS=Oryza... 0.04 OrthoFinder output from all 47 species
AT3G27700 No alias zinc finger (CCCH-type) family protein / RNA recognition... 0.03 OrthoFinder output from all 47 species
Aob_g09082 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.05 OrthoFinder output from all 47 species
Ceric.28G067800.1 Ceric.28G067800 component *(RBM26) of PAXT nucleoplasmic activation... 0.03 OrthoFinder output from all 47 species
Ehy_g29853 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.04 OrthoFinder output from all 47 species
GSVIVT01032423001 No alias Zinc finger CCCH domain-containing protein 41... 0.03 OrthoFinder output from all 47 species
Gb_08836 No alias Zinc finger CCCH domain-containing protein 27 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Msp_g19865 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.03 OrthoFinder output from all 47 species
Msp_g25906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04462 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.03 OrthoFinder output from all 47 species
Ore_g15250 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.02 OrthoFinder output from all 47 species
Ore_g27253 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.03 OrthoFinder output from all 47 species
Pir_g10450 No alias component *(RBM26) of PAXT nucleoplasmic activation... 0.04 OrthoFinder output from all 47 species
Solyc02g086510.4.1 Solyc02g086510 Zinc finger CCCH domain-containing protein 41... 0.03 OrthoFinder output from all 47 species
Zm00001e008334_P001 Zm00001e008334 Zinc finger CCCH domain-containing protein 27 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 775 827
IPR002483 PWI_dom 124 188
No external refs found!