Aspi01Gene04011.t1 (Aspi01Gene04011)

Aliases : Aspi01Gene04011

Description : EC_3.2 glycosylase & original description: none

Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene04011.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00118570	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.02	OrthoFinder output from all 47 species
AT1G19170	No alias	Pectin lyase-like superfamily protein	0.05	OrthoFinder output from all 47 species
AT2G23900	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Als_g11539	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g22061	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0293.g063444	No alias	EC_3.2 glycosylase & original description: CDS=788-2134	0.02	OrthoFinder output from all 47 species
Cba_g21680	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.37G027600.1	Ceric.37G027600	not classified & original description: pacid=50616932...	0.01	OrthoFinder output from all 47 species
Ehy_g07611	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g09567	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14122	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g17286	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01019405001	No alias	Probable polygalacturonase OS=Vitis vinifera	0.05	OrthoFinder output from all 47 species
GSVIVT01026985001	No alias	Probable polygalacturonase OS=Vitis vinifera	0.04	OrthoFinder output from all 47 species
GSVIVT01028860001	No alias	Probable polygalacturonase OS=Vitis vinifera	0.03	OrthoFinder output from all 47 species
LOC_Os02g15690.1	LOC_Os02g15690	Probable polygalacturonase OS=Vitis vinifera...	0.02	OrthoFinder output from all 47 species
LOC_Os05g50960.1	LOC_Os05g50960	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species
LOC_Os07g14160.1	LOC_Os07g14160	Probable polygalacturonase OS=Vitis vinifera...	0.01	OrthoFinder output from all 47 species
LOC_Os09g26800.1	LOC_Os09g26800	Probable polygalacturonase OS=Vitis vinifera...	0.02	OrthoFinder output from all 47 species
MA_11025g0010	No alias	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species
MA_98717g0010	No alias	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species
Nbi_g40127	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g06397	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g18430	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g10961	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007744	No alias	EC_3.2 glycosylase & original description: CDS=819-1838	0.03	OrthoFinder output from all 47 species
Solyc06g009790.4.1	Solyc06g009790	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species
Solyc07g042160.3.1	Solyc07g042160	Probable polygalacturonase OS=Vitis vinifera...	0.02	OrthoFinder output from all 47 species
Solyc09g075460.3.1	Solyc09g075460	Probable polygalacturonase OS=Vitis vinifera...	0.02	OrthoFinder output from all 47 species
Spa_g26618	No alias	EC_3.2 glycosylase & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g39268	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e023760_P001	Zm00001e023760	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species
Zm00001e029809_P002	Zm00001e029809	Probable polygalacturonase OS=Vitis vinifera...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	174	454

External Links

No external refs found!

Aspi01Gene04011.t1 (Aspi01Gene04011)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation