Aspi01Gene03019.t1 (54CP, SRP54CP,...)

Aliases : 54CP, SRP54CP, CPSRP54, FFC, Aspi01Gene03019

Description : component *(cpSRP54) of thylakoid membrane SRP insertion system & original description: none

Gene families : OG0005930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005930_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene03019.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00031p00204460	54CP, SRP54CP,...	Protein translocation.chloroplast.thylakoid membrane SRP...	0.02	OrthoFinder output from all 47 species
AT5G03940	54CP, SRP54CP,...	chloroplast signal recognition particle 54 kDa subunit	0.02	OrthoFinder output from all 47 species
Aev_g05995	54CP, SRP54CP,...	component *(cpSRP54) of thylakoid membrane SRP insertion...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021464.55	54CP, SRP54CP,...	Protein translocation.chloroplast.thylakoid membrane SRP...	0.02	OrthoFinder output from all 47 species
Cre11.g479750	54CP, SRP54CP,...	Protein translocation.chloroplast.thylakoid membrane SRP...	0.01	OrthoFinder output from all 47 species
LOC_Os11g05552.1	54CP, SRP54CP,...	Signal recognition particle 54 kDa protein,...	0.04	OrthoFinder output from all 47 species
Lfl_g04096	54CP, SRP54CP,...	component *(cpSRP54) of thylakoid membrane SRP insertion...	0.03	OrthoFinder output from all 47 species
Sam_g29558	No alias	component *(cpSRP54) of thylakoid membrane SRP insertion...	0.03	OrthoFinder output from all 47 species
Zm00001e024147_P003	54CP, SRP54CP,...	component cpSRP54 of thylakoid membrane SRP insertion system	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000897	SRP54_GTPase_dom	230	401
IPR013822	Signal_recog_particl_SRP54_hlx	135	212

External Links

No external refs found!

Aspi01Gene03019.t1 (54CP, SRP54CP,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation