1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene01147.t2

Aspi01Gene01147.t2 (Aspi01Gene01147)


Aliases : Aspi01Gene01147

Description : metabolite transporter *(DTX) & original description: none


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene01147.t2
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT2G04066 No alias MATE efflux family protein 0.01 OrthoFinder output from all 47 species
Ala_g16023 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37089 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12848 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23210 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007649001 No alias Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
Len_g20697 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
MA_904804g0010 TT12, ATTT12 metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015885 No alias metabolite transporter *(DTX) & original description: CDS=1-1521 0.03 OrthoFinder output from all 47 species
Solyc03g112250.1.1 Solyc03g112250 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Spa_g05126 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25659 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004788_P001 Zm00001e004788 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e035104_P001 Zm00001e035104 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002528 MATE_fam 65 224
IPR002528 MATE_fam 286 447
No external refs found!