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  5. Dcu_g50697

Dcu_g50697


Description : component *(MED17) of head module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0007634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g50697
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Adi_g059039 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
LOC_Os12g44140.1 LOC_Os12g44140 component MED17 of head module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Lfl_g19257 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Mp5g24300.1 No alias component MED17 of head module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!